As a result of the significant disruption that is being caused by the COVID-19 pandemic we are very aware that many researchers will have difficulty in meeting the timelines associated with our peer review process during normal times. Please do let us know if you need additional time. Our systems will continue to remind you of the original timelines but we intend to be highly flexible at this time.
Announcement: COVID-19 impact on peer review
Featured review: transposable element landscapes in yeast models
Genomics and other large-scale analyses have drawn attention to the potential impacts of TEs on their host genomes. However, it remains challenging to transition from identifying potential roles to clearly demonstrating the level of impact TEs have on genome evolution and possible functions that they contribute to their host organisms. In this new review, author Patrick Maxwell summarizes TE content and distribution in four well-characterized yeast model systems in this review.
Featured Article
Comparative analysis on the expression of L1 loci using various RNA-Seq preparations
The role of DNA methylation in aging has been widely studied. However, epigenetic mutations, here defined as aberrant methylation levels compared to the distribution in a population, are less understood. For this Methodology, our authors developed whole-cell, cytoplasmic and nuclear RNA-Seq datasets from 22Rv1 prostate cancer cells to test the influence of different preparations on the quality and effort needed to measure L1 expression.
Call for Papers: Endogenous Retroviruses in Evolution and Disease
The Editors of Mobile DNA and Retrovirology extend an invitation to submit original research articles related to endogenous retroviruses to their new collection: Endogenous Retroviruses in Evolution and Disease.
Open for submissions: May 24, 2019
Submit an article to Mobile DNA for the series.
Articles
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Identification of RAG-like transposons in protostomes suggests their ancient bilaterian origin
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Diverse transposable element landscapes in pathogenic and nonpathogenic yeast models: the value of a comparative perspective
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AcademH, a lineage of Academ DNA transposons encoding helicase found in animals and fungi
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Variation in base composition underlies functional and evolutionary divergence in non-LTR retrotransposons
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Non-long terminal repeat (non-LTR) retrotransposons: mechanisms, recent developments, and unanswered questions
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Transposable element detection from whole genome sequence data
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Biotechnological applications of mobile group II introns and their reverse transcriptases: gene targeting, RNA-seq, and non-coding RNA analysis
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The expanding universe of transposon technologies for gene and cell engineering
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Mobilizing diversity: transposable element insertions in genetic variation and disease
Review collection
All Reviews
Repository for all published Review articles. Contributions from some of the leading researchers working with mobile DNA.
Article collection
Mobile DNA Tools
Repository for all published articles on softwares, databases, and methodologies.
2019
Thematic series
Endogenous Retroviruses in Evolution and Disease
Cross-journal series with Retrovirology. Edited by the Editors-in-Chief of Mobile DNA and Retrovirology.
Thematic series
Transposable Elements in Model Organisms (coming soon)
Edited by the Editors-in-Chief
2015
Thematic series
Keystone Symposium: Mobile Genetic Elements and Genome Evolution
Edited by: Henry Levin, Parmit Singh
2014
Review series
Mobile genetic elements in biotechnology
Edited by: Henry Levin, Thomas Eickbush, Marlene Belfort, Nancy Craig, Cedric Feschotte
2013
Review series
Mobile introns review series
Edited by: Thomas Eickbush, Marlene Belfort, Nancy Craig, Daniel Voytas
Pre-submission Inquiries
The Editors-in-Chief of Mobile DNA welcome authors to send any pre-submission inquiries they might have to the Editorial Email address, which can be found here by clicking on "Contact Us" (upper left side of page). We ask that you please include “Pre-submission inquiry” in the subject line of your email and that you include the title and abstract of your proposed submission within the message. Our Editors will do their best to respond to you in a timely manner.
Editors' Picks
Highlights from recent literature on mobile elements, selected by the Editors-in-Chief.
Toxin-Antitoxin Gene Pairs Found in Tn3 Family Transposons Appear To Be an Integral Part of the Transposition Module. [mBio. 2020] PubMed
The UCSC repeat browser allows discovery and visualization of evolutionary conflict across repeat families. [Mob DNA. 2020] PubMed
TranspoScope - Interactive Visualization of Retrotransposon Insertions. [Bioinformatics. 2020] PubMed
RepeatModeler2 for automated genomic discovery of transposable element families. [Proc Natl Acad Sci U S A. 2020] PubMed
Transposon mobilization in the human fungal pathogen Cryptococcus is mutagenic during infection and promotes drug resistance in vitro. [Proc Natl Acad Sci U S A. 2020] PubMed
Editors-in-Chief
Irina Arkhipova, Marine Biological Laboratory at Woods Hole
Cédric Feschotte, Cornell University
Haig Kazazian, Johns Hopkins University
Henry Levin, NIH
In 2019, we welcomed our new Associate Editors:
Orsolya Barabas, European Molecular Biology Laboratory (EMBL), Germany
Gael Cristofari, Institut National de la Santé et de la Recherche Médicale, France
Adam Ewing, Mater Research Institute-University of Queensland, Australia
Clément Gilbert, CNRS, Université Paris Saclay, France
Molly G Hammell, Cold Spring Harbor Laboratory, USA
Damon R Lisch, Purdue University, USA
Joe Peters, Cornell University, USA
Phoebe Rice, The University of Chicago, USA
Aims and scope
Mobile DNA is an open access, peer-reviewed journal that publishes articles providing novel insights into DNA rearrangements in all organisms, ranging from transposition and other types of recombination mechanisms to patterns and processes of mobile element and host genome evolution. In addition, the journal will consider articles on the utility of mobile genetic elements in biotechnological methods and protocols.
TE Digest
Updated monthly, check out the newest published research on transposable elements in the TE Digest on Alexander Suh of Uppsala University's Genomicrocosm page here.
Links to Useful TE Community Resources
Transposable elements labs directory
Women in TEs (maintained by Cedric Feschotte)
Job vacancies
Transposons Worldwide SLACK Page (Managed by Rebecca Berrens)
Mobile DNA Tools Collection
TE digest (Managed by Alexander Suh)
Forthcoming meetings
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Annual Journal Metrics
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Speed
38 days to first decision for reviewed manuscripts only
33 days to first decision for all manuscripts
108 days from submission to acceptance
17 days from acceptance to publication
Citation Impact
3.630 - 2-year Impact Factor
4.405 - 5-year Impact Factor
1.206 - Source Normalized Impact per Paper (SNIP)
4.407 - SCImago Journal Rank (SJR)
Usage
180,324 Downloads
946 Altmetric Mentions
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