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Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study

The Original Article was published on 14 December 2019

Correction to: Mobile DNA

https://doi.org/10.1186/s13100-019-0186-z

Following publication of the original article [1], the authors spotted an error in TableĀ 2.

  • t-test pvalue in penultimate rowā€‰=ā€‰ā€œ0.61ā€ should not be bold

  • the asterisks with significance levels should be as follows: ā€œ(* for p < 0.1, ** for p < 0.01 and *** for p < 0.001)ā€

The original article has been corrected. The correct presentation of Table 2 is shown below.

Table 2 Palindromes within sequences flanking the insertion site. We used the paldpl program to detect approximate palindromes of at least 3ā€‰bp with no more than 30% mismatches or indels. This analysis was done in native flanking sequences identified in plant genomes and their randomized (permutated) counterparts, to control for base content effects. We carried out a paired t-test for difference in calculated stem lengths of the native and randomized palindromes. Significant values after Benjamini-Hochberg correction for multiple family testing are marked with an asterisk and printed in bold (* for pā€‰<ā€‰0.1, ** for pā€‰<ā€‰0.01 and *** for pā€‰<ā€‰0.001). Three families with increased mean palindrome stem length after randomization are marked with a tilde

Reference

  1. Jedlicka, et al. Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study. Mobile DNA. 2019;10:50. https://doi.org/10.1186/s13100-019-0186-z.

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Correspondence to Eduard Kejnovsky.

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Jedlicka, P., Lexa, M., Vanat, I. et al. Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study. Mobile DNA 11, 3 (2020). https://doi.org/10.1186/s13100-019-0199-7

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  • DOI: https://doi.org/10.1186/s13100-019-0199-7