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Fig. 1 | Mobile DNA

Fig. 1

From: Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast

Fig. 1

Sample screenshots from the new interactive HTML report in McClintock 2. The HTML report generates summary information for the McClintock run including interactive bar plots for: (A) the number of reference, non-reference, and total number of predictions made across all TE families by all 12 component methods; and (B) the number of reference, non-reference, and total number of predictions made for a specific component method (e.g., RelocaTE2). Barplots from the report shown were generated by a complete McClintock run (commit SHA d2b819a) applied to Illumina 101-bp paired-end sequences for S. cerevisiae strain YJM1460 (SRA: SRR800842) down-sampled to 50\(\times\) fold-coverage

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ISSN: 1759-8753