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Fig. 1 | Mobile DNA

Fig. 1

From: CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes

Fig. 1

Overview of CAULIFINDER Branch A workflow. The line of arrows at the top represents the four main steps of the workflow. Grey boxes indicate successive sub-steps with the main tools highlighted in red font. The dark grey box comprises several analyses that are run on the consensus library. The main output files are shown in blue boxes. The input datasets are shown in khaki boxes with arrows indicating in which sub-step they are used. The red two-headed arrow represents the “blastclust_supplementation” option (default = FALSE). The purple two-headed arrow represents the “filter_chimeras” option (default = TRUE)

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Mobile DNA

ISSN: 1759-8753