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Table 2 RepeatMasker output of RepeatMasker library and the species-specific custom-built library for the Drosophila melanogaster genome (release 6 [50])

From: Characterization of transposable elements within the Bemisia tabaci species complex

 

RepBase (%)

Custom Library (%)

DNA

1.79

1.21

LINE

4.93

4.50

SINE

 < 0.001

0.00

LTR

10.68

10.22

Unclassified

0.04

0.34

Total Interspersed Repeats

17.44

16.88

  1. Comparison of the results of the identification of TEs using RepeatMasker RepBase library and the species-specific repeat library in the D. melanogaster genome. The custom-built repeat library was built using the workflow described in the study
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Mobile DNA

ISSN: 1759-8753