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Table 1 Repetitive elements identified in the three whitefly genomes

From: Characterization of transposable elements within the Bemisia tabaci species complex

  MEAM1 MED/Q SSA-ECA
Published RepBase Custom Library Published RepBase Custom Library Published RepBase Custom Library
DNA 29.25 18.07 25.28 15.66 16.48 23.42 25.94 12.92 19.86
Retroelements   0.86 2.6   0.61 2.65   0.42 1.72
LINE 0.96 0.61 1.25 3.18 0.57 0.96 0.44 0.38 0.94
SINE 0.16 0.04 0.17 0.96 0.04 0.18 0.16 0.04 0.08
LTR 0.49 0.21 1.19 18.5 0.19 1.51 0.08 0.07 0.7
Unknown 12.96 0 16.26 1.99 0 14.81 11.9 0 15.22
Total 43.82 18.92 44.14 40.29 17.28 40.88 38.52 13.41 36.8
  1. Results of the identification of TEs reported by their respected studies, using the last publicly available RepBase library (RepBase RepeatMasker-edition20180826), and the custom-built repeat library built using the workflow described in the study