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Table 4 Summary of genomic distribution of TE-gene cis loci pairs in AM and AT2 cells identified by linear model test. Number of significantly observed changes (p.adjsuted < 0.05, BH adjusted) are shown per each genomics region

From: The derepression of transposable elements in lung cells is associated with the inflammatory response and gene activation in idiopathic pulmonary fibrosis

TE family Intron Intergenic 3’UTR3 5’UTR
AT2
 SINE 30 5 38 1
 LINE 26 3 26 0
 LTR 14 4 11 1
 Other 5 0 7 1
AM
 SINE 7 0 46 3
 LINE 4 0 22 0
 LTR 1 0 5 0
 Other 1 0 14 1