Table 3 Characteristics of the simple repeats in the SINE flanking regions
From: SINE Retrotransposon variation drives Ecotypic disparity in natural populations of Coilia nasus
Loci | Flanks | Repeat unit | Sites |
|---|---|---|---|
Ls2 | 5′ | (G)38 | −76 |
Ls61 | 5’ | (A)17 | −1 |
Ls11 | 5’ | (TG)26 | −55 |
Ls26 | 5’ | (CA)16 | −56 |
Ls69 | 5’ | (CA)14 | −48 |
Ls29 | 5’ | (CG)18 | −16 |
Ls62 | 5’ | (CT)7 | −85 |
Ls52 | 5’ | (AAC)17(AAT)8 | −3 |
Ls32 | 5’ | (ATTAC)7 | −2 |
Ls18 | 5’ | (TTATTTAA)3 | −10 |
Ls12 | 5’ | (TTGGACCAGC)6 | −3 |
Ls43 | 5’ | (ACTAGGGAACTACCAGGGGG)14 | −8 |
Ls44 | 3’ | (GT)10 | + 115 |