Table 3 Codon usage statistics for the TE families identified in the S. rosetta genome

 Sroscv1

49.12

0.569

0.634

0.486

 Sroscv2

45.22

0.598

0.627

0.450

 Sroscv3

55.48

0.526

0.594

0.494

 Sroscv4

42.06

0.694

0.763

0.552

 Sroscv5

46.35

0.620

0.701

0.485

 Srosgyp1

40.27

0.698

0.791

0.492

 Srosgyp2

40.10

0.672

0.768

0.541

 Srospv1

46.84

0.603

0.682

0.491

 Srospv2

38.05

0.729

0.784

0.497

 Srospv3

37.03

0.746

0.805

0.489

 Srospv4

48.09

0.450

0.570

0.483

 Srospv5

49.28

0.550

0.641

0.466

Mean

44.82 ± 5.45

0.621 ± 0.089

0.697 ± 0.083

0.494 ± 0.028

 SrosH

45.17

0.615

0.740

0.555

 SrosHar

58.55

0.448

0.530

0.514

 SrosM

55.00

0.522

0.620

0.540

 SrosS

50.80

0.565

0.654

0.529

 SrosTig1

54.90

0.505

0.578

0.483

 SrosTig2

52.47

0.488

0.578

0.517

 SrosTm

49.61

0.612

0.709

0.486

Mean

52.14 ± 4.47

0.581 ± 0.077

0.63 ± 0.08

0.518 ± 0.027