Table 1 The cutoffs used and the number of SVA loci identified in each individual

NA12872

CEPH

1459

paternal grandfather

(5,10)

1388

157

15

(16,10)

254

68

1

NA12873

CEPH

1459

paternal grandmother

(5,10)

1383

159

6

(14,10)

252

64

1

NA12864

CEPH

1459

father

(5,10)

1407

178

15

(12,10)

263

76

2

NA12874

CEPH

1459

maternal grandfather

(3,4)

1394

169

16

(4,6)

339

156

0

NA12875

CEPH

1459

maternal grandmother

(4,10)

1407

174

12

(13,10)

263

73

4

NA12865

CEPH

1459

mother

(4,10)

1399

171

13

(9,10)

270

80

1

NA12891

CEPH

1463

maternal grandfather

(4,10)

1394

164

10

(11,10)

266

76

1

NA12892

CEPH

1463

maternal grandmother

(5,10)

1387

158

6

(11,10)

265

75

0

NA12878

CEPH

1463

mother

(4,10)

1397

167

13

(13,10)

262

73

1

NA18501

YRI

Y004

father

(3,10)

1399

178

12

(4,10)

390

202

4

NA18502

YRI

Y004

mother

(5,10)

1398

173

14

(11,10)

271

83

2

NA18500

YRI

Y004

child

(4,9)

1401

167

13

(9,10)

285

96

4

NA18504

YRI

Y005

father

(3,10)

1398

168

7

(9,10)

283

92

3

NA18505

YRI

Y005

mother

(4,10)

1408

175

9

(15,10)

268

80

2

NA18503

YRI

Y005

child

(4,10)

1393

167

10

(11,10)

277

87

3

NA18507

YRI

Y009

father

(3,10)

1408

176

11

(11,10)

268

80

3

NA18508

YRI

Y009

mother

(5,10)

1408

175

15

(10,10)

276

87

2

NA18506

YRI

Y009

child

(3,7)

1404

177

13

(10,10)

270

84

2

NA18517

YRI

Y013

mother

(4,10)

1420

185

23

(10,10)

268

82

5

NA18515

YRI

Y013

child

(5,10)

1394

162

13

(17,10)

261

73

2

NA18521

YRI

Y016

child

(6,10)

1388

161

14

(9,10)

280

91

3

Total

1722

428

151

521

310

29