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Table 2 LTR retrotransposon families investigated in this study

From: Isolation and characterization of putative functional long terminal repeat retrotransposons in the Pyrus genome

Family Size (kb) Copy number/total retrotransposons Type Ref Seq ID of similar sequence in Repbase
Family I 5141 29/373 copia AJSU01007348.1
(8605–13,745 bp)
Copia-24_PX
Family II 5355 15/373 copia AJSU01000113.1
(27,402–32,756 bp)
Copia-106_Mad
Family III 6482 20/373 copia AJSU01017137.1
(16,748–23,229 bp)
Copia-90_Mad
Family IV 5123 14/373 copia AJSU01025615.1
(15,180–10,058 bp)
Copia-53_Mad
Family V 5670 5/67 gypsy AJSU01016963.1
(42,874–37,205 bp)
Gypsy-5_Mad