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Table 4 Sadhu sequences from Arabidopsis arenosa.

From: The structure, organization and radiation of Sadhu non-long terminal repeat retroelements in Arabidopsis species

Sequence name

Length (bp) of Sadhu sequence

Genbank accession number

Arabidopsis thaliana primer origin

Closest A. thaliana homolog (pairwise blast)

Percentage identity to A. thaliana ortholog

AaSadhu1

283

DQ680035

Sadhu1-3

Sadhu1-2

81

AaSadhu1FP1

204

EF535557

Sadhu1 5' TAIL

Sadhu1-1

74

AaSadhu1FP2

117

EF535558

Sadhu1 5' TAIL

Sadhu1-3

85

AaSadhu1FP3

45

EF535559

Sadhu1 5' TAIL

Sadhu1-3

82

AaSadhu1TP1

470

EF535560

Sadhu1 3' TAIL

Sadhu1-2

80

AaSadhu1TP2

232

EF535561

Sadhu1 3' TAIL

Sadhu1-3

84

AaSadhu1TP3

478

EF535565

Sadhu1 3' TAIL

Sadhu1-3

85

AaSadhu1TP4

480

EF535564

Sadhu1 3' TAIL

Sadhu1-3

84

AaSadhu3

686

DQ680038

Sadhu3-1

Sadhu3-2

86

AaSadhu3FP1

49

EF535567

Sadhu3 5' TAIL

Sadhu3-1

91

AaSadhu3TP1

188

EF535566

Sadhu3 3' TAIL

Sadhu3-2

86

AaSadhu5

344

DQ680036

Sadhu5-1, Sadhu5-2

Sadhu5-1

88

AaSadhu5FP1

94

EF535550

Sadhu5 5' TAIL

Sadhu5-1

87

AaSadhu5TP1

384

EF535551

Sadhu5 3' TAIL

Sadhu5-2

86

AaSadhu8

472

DQ680033

Sadhu8-1

Sadhu8-1

79

AaSadhu8FP1

202

EF535553

Sadhu8 5' TAIL

Sadhu8-1

76

AaSadhu8TP1

149

EF535556

Sadhu8 3' TAIL

Sadhu8-1

79

  1. TAIL PCR = thermal asymmetric interlaced polymerase chain reaction.