Table 1 Summary of B. hordei (isolate DH14) non-redundant consensus repeats
Type | Family | Number of consensus elements | Median length [bp] | Number of elements in the B. hordei reference genome | |
|---|---|---|---|---|---|
Full-length | Partial | ||||
Retrotransposon | LTR/Ty3a | 116 | 5686 | 1709 | 27,763 |
| Â | LTR/Ty1b | 122 | 5175 | 1830 | 32,351 |
| Â | LTR/unknown | 3 | 1599 | 43 | 2571 |
| Â | LINE/Tad1 | 80 | 6057.5 | 1303 | 41,914 |
| Â | NonLTR/retroposon | 3 | 859 | 823 | 2510 |
| Â | SINE/Egh24 | 1 | 884 | 2129 | 5005 |
| Â | SINE/Eg-R1 | 1 | 657 | 1667 | 625 |
DNA transposon | DTT/Mariner | 3 | 1728 | 1295 | 8322 |
| Â | DH/Helitron | 2 | 3506 | 32 | 1002 |
| Â | DTM/MULE | 7 | 4996 | 1336 | 6853 |
| Â | DTC/CACTA | 5 | 1847 | 1682 | 4567 |
| Â | DTH/Harbinger | 1 | 491 | 58 | 134 |
Other | Satellite | 1 | 15,649 | 0 | 158 |
| Â | Low complexity | 1 | 2134 | 7 | 752 |
| Â | Simple repeat | 1 | 633 | 0 | 14 |
| Â | Unknown | 6 | 2468 | 26 | 1709 |