Fig. 4
From: Teleost genomic repeat landscapes in light of diversification rates and ecology
Net diversification rates analyses. a. Family-specific net diversification rates as estimated by Scholl and Wiens [46]. b. Family-level PGLS regressions between repetitive DNA variables, ecological variables, and genome assembly sizes that reached a 10% alpha-level (P < 0.1). c. Net diversification rates as a function of the proportion of TEs in the genome. The blue line and the shaded area indicate the regression of a linear model with 95% confidence interval. The box above the plot indicates the result from the PGLS regression. d. Multiple PGSL regression model with net diversification rates as a response, showing the PGLS estimates of the variables in b. in addition to the estimates of contig N50 and the number of BUSCO genes. Asterisks indicate that the explanatory variables had significant contributions at the 1% alpha level (**) or at the 5% alpha level (*). See Supplementary Table 5 for model estimates without normalization