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Fig. 3 | Mobile DNA

Fig. 3

From: Retro-miRs: novel and functional miRNAs originating from mRNA retrotransposition

Fig. 3

Retrocopy-derived miRNAs (retro-miRs) are expressed in normal tissues and cell lines. A Expression (median per tissue) of retro-miRs in normal samples (404 individuals, 32 tissues) and cell lines (48 samples of stem cells) from the FANTOM phase 5 [29, 30]. B Table showing the presence (in green) or absence (in red) of a transcription start site (TSS) upstream of the retro-miR, a bubble plot representing the intensity of expression of retro-miRs, as well as the number of tissues in which they were expressed and presence of ENCODE Candidate Cis-Regulatory Elements (cCREs) nearby retrocopies hosting the retro-miRs. C Expression level per number of tissues of all known human miRNAs. Retro-miRs are marked in colors, while all other miRNAs are represented by gray dots (expression based on samples from FANTOM phase 5 [29, 30]). Only expressed retro-miRs are shown in A and C

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