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Fig. 2 | Mobile DNA

Fig. 2

From: Stowaway miniature inverted repeat transposable elements are important agents driving recent genomic diversity in wild and cultivated carrot

Fig. 2

The number, distribution, and functional annotation of DcSto insertion sites within genic regions. a The number of DcSto insertions within 2 kb of the nearest gene in windows of 20 bp, with the up- and downstream regions being coloured blue and green, respectively. b The number of DcSto insertions in up- and downstream regions, exons (cds), introns and UTRs. c The number of DcSto insertions per 100 kb (standardised to the cumulative length of each region). d Differences in the distribution of DcSto families within genic regions (p = 5e-4), with cds regions not being included in the analysis. Colour scale reflects deviation from the average value. The size of circles is proportional to the contribution of each test to the total Pearson chi-squared score, and the number inside each cell is the Pearson’s residual. e Singular enrichment analysis (SEA) of all DcSto-associated genes, using AgriGO to define molecular functions

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ISSN: 1759-8753