A. | B. | Northern clade | Southern clade |
---|
P. anubis | P. hamadryas | P. papio | P. cynocephalus | P. ursinus | P. kindae |
---|
LIV5 | L142 | 97124 | 97074 | 28547 | 30388 | 16066 | 16098 | 28697 | 28755 | 34449 | 34474 |
---|
2 | 1139 | 112 | 122 | 192 | 179 | 136 | 146 | 127 | 140 | 155 | 111 | 486 | 372 |
3 | 989 | 174 | 169 | 210 | 205 | 166 | 184 | 227 | 231 | 249 | 185 | 537 | 430 |
4 | 944 | 296 | 248 | 268 | 261 | 206 | 259 | 282 | 297 | 343 | 247 | 567 | 502 |
5 | 839 | 294 | 290 | 248 | 280 | 241 | 294 | 342 | 375 | 413 | 310 | 574 | 534 |
6 | 938 | 396 | 396 | 360 | 381 | 370 | 396 | 491 | 497 | 531 | 421 | 727 | 662 |
7 | 851 | 495 | 466 | 448 | 456 | 395 | 430 | 497 | 480 | 505 | 428 | 702 | 655 |
8 | 991 | 626 | 638 | 631 | 645 | 546 | 617 | 623 | 663 | 677 | 584 | 849 | 929 |
9 | 1171 | 899 | 865 | 830 | 851 | 811 | 869 | 824 | 862 | 894 | 759 | 1040 | 1035 |
10 | 1881 | 1659 | 1635 | 1531 | 1522 | 1442 | 1516 | 1501 | 1563 | 1590 | 1405 | 1732 | 1714 |
11 | 3213 | 2980 | 2971 | 2890 | 2907 | 2966 | 3104 | 2811 | 2884 | 3025 | 2636 | 3079 | 3090 |
| 12,956 | | | | | | | | | | | | |
- The number of Alu insertion polymorphisms ascertained from T. gelada and not fixed in all 12 Papio individuals was calculated to be 12,956. The distribution of these when shared between any of 2 to 11 of the 12 Papio individuals (column A, 2 to 11) is shown in column B. The sum of the values in column B is 12,956. The ID for each Papio individual is shown at the top of the twelve adjacent columns, for each of the six Papio species, separated by northern and southern clades. The numbers in each column represent the number of times that the shared insertion with T. gelada was predicted in that individual. For example, when an Alu insertion was predicted to be shared in 4 of the 12 individuals and absent from the other 8, one of the four (column A, row 4) was P. anubis LIV5 296 times and one of the four was P. kindae 34474 (BZ11050) 502 times. All 12 Papio individuals share hundreds of Alu insertion polymorphisms with T. gelada in all categories. No Papio individuals are preferentially excluded from having shared insertions with T. gelada. ANOVA detected between-group differences in bins 2–10, but not bin 11. P. kindae has significantly more shared insertion events with T. gelada than all other five Papio species in bins 2 to 4 and 7 to 8, while significantly more in all except P. ursinus in the remaining bins 5, 6, 9 and 10. See Fig. 1