From: Convergence of retrotransposons in oomycetes and plants
Taxonomic position according to the NCBI taxonomy | RT-associated RNHs number | Individual RNHs number | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Order | Family | Genus | Species | Chronos | Archon | L1 | Utopia | aRNH | fmRNH | ||
aRNH 1 | aRNH 2 | aRNH 3 | |||||||||
Albuginales | Albuginaceae | Albugo | A. candida | - | - | - | - | - | - | - | 2 |
 |  |  | A. laibachii | - | - | - | - | - | - | - | 1 |
Peronosporales | Peronosporaceae | Hyaloperonospora | H. arabidopsidis Emoy2 | 57 | - | 88 | - | - | 1 | - | 1 |
 |  | Phytophthora | P. alni | 106 | - | 3 | 2 | 4 | - | - | 7 |
 |  |  | P. capsici | 64 | - | 14 | 16 | 1 | 1 | - | 1 |
 |  |  | P. cinnamomi var cinnamomi | 92 | - | 3 | 5 | - | 1 | - | 1 |
 |  |  | P. infestans T30-4 | 1555 | - | 43 | 25 | - | 1 | - | 2 |
 |  |  | P. kernovia 00238/432 | 3 | - | - | 1 | - | 1 | - | 1 |
 |  |  | P. lateralis MPF4 | 30 | - | 7 | 5 | - | 1 | - | 2 |
 |  |  | P. parasitica P1569 | 11 | - | - | 1 | 1 | 1 | - | 4 |
 |  |  | P. pinifolia CBS 122922 | 75 | - | 26 | 2 | 8 | 2 | - | 2 |
 |  |  | P. ramorum | 120 | - | 11 | 14 | - | 1 | - | 3 |
 |  |  | P. sojae | 271 | - | 35 | 31 | 2 | 1 | - | 4 |
 |  |  | Average | 233 | - | 18 | 10 | 3 | 1 | - | 3 |
 |  | Phytopythium | P. vexans | 1 | - | - | 1 | - | 1 | - | 2 |
 |  | Pseudoperonospora | P. cubensis MSU-1 | - | - | - | - | - | - | - | 1 |
Pythiales | Pythiaceae | Pythium | P. aphanidermatum | 5 | - | 3 | - | - | 1 | - | 1 |
 |  |  | P. arrhenomanes | 5 | - | 5 | 2 | - | 1 | - | 1 |
 |  |  | P. insidiosum | 33 | - | 43 | 2 | - | 1 | - | 1 |
 |  |  | P. irregulare | 1 | - | - | 1 | - | 1 | - | 2 |
 |  |  | P. iwayamai | 1 | - | 3 | - | - | 1 | - | 2 |
 |  |  | P. ultimum var. ultimum | - | - | 74 | 7 | - | 1 | - | 2 |
 |  |  | Average | 9 | - | 26 | 3 | - | 1 | - | 2 |
Saprolegniales | Saprolegniaceae | Aphanomyces | A. astaci APO3.2 | 1 | - | - | - | - | - | 3 | 1 |
 |  |  | A. invadans 9901.2 | - | - | - | - | - | - | - | 1 |
 |  |  | Average | 1 | - | - | - | - | - | 3 | 1 |
 |  | Saprolegnia | S. diclina VS20 | - | 3 | - | 1 | - | 1 | 10 | 1 |
 |  |  | S. parasitica CBS 223.65 | - | 2 | - | - | - | 1 | 4 | 1 |
 |  |  | Average | - | 3 | - | 1 | - | 1 | 7 | 1 |