| ORF1 | ||||||||
---|---|---|---|---|---|---|---|---|---|
Lineage/subgroupa | No. Seqs | Av. RT nt% pairwise identityb | Type/subtypec | Domaind | Length aae | Av. aa% pairwise identityf | Top hitg | Probh | No. RRMs/CCHCs |
L2_1 | 13 | 82.2 | V | No hits | Â | Â | Â | Â | Â |
L2_2 | 16 | 58.2 | IC | PHD | 50 | 30.0 | 3zpv_A | 98.2 | Â |
 |  |  |  | RRM | 155 | 26.0 | 2ghp_A | 80.7 | 2 |
 |  |  |  | CCHC | 67 | 46.1 | PTHR23002 | 98.5 | 3 |
L2_3 | 43 | 57.6 | IIA | Tnp22 | 158 | 30.6 | 2yko_A | 100.0 | 1 |
L2_4 | 7 | 64.8 | IIIA | PHD | 51 | 43.0 | 2vpb_A | 99.7 | Â |
L2_5 | 8 | 52.2 | IIB | Tnp22 | 208 | 27.7 | 2yko_A | 100.0 | 1 |
 |  |  |  | PHD | 55 | 29.1 | 3lqh_A | 99.7 |  |
L2_6 | 23 | 55.9 | IIC | PHD | 51 | 42.5 | 2vpb_A | 96.6 | Â |
 |  |  |  | Tnp22 | 209 | 35.5 | 2yko_A | 100.0 | 1 |
L2_7 | 7 | 50.3 | IIA | Tnp22 | 191 | 21.7 | 2yko_A | 100.0 | 1 |
L2_8 | 4 | 62.7 | IC | RRM | 188 | 34.5 | 3smz_A | 86.7 | 2 |
 |  |  |  | CCHC | 60 | 45.3 | PTHR23002 | 99.2 | 3 |
L2_9 | 4 | 57.1 | IVA | Esterase | 176 | 28.0 | 3p94_A | 99.9 | Â |
L2_10 | 2 | 79.0 | IA | RRM | 63 | 85.9 | 2lkz_A | 90.2 | Â |
 |  |  |  | CCHC | 64 | 76.9 | PTHR23002 | 98.9 |  |
Jockey_1 | 75 | 51.8 | IB | RRM | 143 | 29.1 | 2cjk_A | 96.6 | 2 |
 |  |  |  | CCHC | 55 | 46.2 | PTHR23002 | 98.9 | 3 |
Jockey_2 | 12 | 51.6 | IA | RRM | 74 | 32.5 | 2lxi | 93.8 | 1 |
 |  |  |  | CCHC | 54 | 39.4 | PTHR23002 | 98.8 | 3 |
CR1_1 | 22 | 53.5 | IIA | Tnp22 | 186 | 23.5 | 2yko_A | 98.5 | 1 |
CR1_2 | 11 | 70.0 | V | PHD | 50 | 41.3 | 2vpb_A | 94.6 | Â |
CR1_3 | 8 | 58.8 | IC | PHD | 53 | 48.1 | 2vpb_A | 96.3 | Â |
 |  |  |  | CC | 34 | 22.3 |  |  |  |
 |  |  |  | RRM | 144 | 37.1 | 1b7f_A | 93.8 | 2 |
 |  |  |  | CCHC | 65 | 46.8 | PTHR23002 | 98.3 | 3 |
CR1_4 | 112 | 53.1 | IIIB | PHD | 53 | 27.6 | 3zpv_A | 95.0 | Â |
 |  |  |  | RRM | 53 | 28.4 | 2dhg_A | 79.4 | 1 |
CR1_5 | 3 | 58.1 | IIC | PHD | 50 | 71.9 | 2vpb_A | 99.4 | Â |
 |  |  |  | Tnp22 | 129 | 41.8 | 2yko_A | 63.1 | 1 |
CR1_6 | 18 | 54.0 | IIIA | PHD | 48 | 40.6 | 1wep_A | 99.4 | Â |
CR1_7 | 56 | 62.9 | IVB | lz | 44 | 34.0 | 2yon_A | 85.1 | Â |
 |  |  |  | zf | 44 | 34.0 | 2gmg_A | 37.1 |  |
 |  |  |  | Esterase | 174 | 43.5 | 2waa_A | 99.7 |  |
CR1_8 | 4 | 61.5 | Â | Tnp22 | 175 | 36.5 | 2yko_A | 100.0 | Â |