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Figure 1 | Mobile DNA

Figure 1

From: The Tc1/mariner transposable element family shapes genetic variation and gene expression in the protist Trichomonas vaginalis

Figure 1

Tvmar1 allele frequency spectrum and insertion frequencies. (A) Tvmar1 allele frequency spectrum in a panel of 94 T. vaginalis isolates. The x-axis represents frequencies, while the y-axis represents counts. (B) Tvmar1 insertion frequencies in a panel of 94 T. vaginalis isolates. The gradient of Tvmar1 frequencies (from 0.0 to 1.0) identified in different isolates is represented as a heatmap, with colors indicating the following: blue represents no insertion; white represents intermediate frequencies; and red represents fixation or elements that are close to fixation. Two dendrograms are shown. The top dendrogram represents the clustering of loci based on their similarity by frequency. The dendrogram on the left represents clustering based on the frequency of all the loci used in the study. AUS, Australia; ITA, Italy; LST, laboratory strains; MEX, Mexico; PNG, Papua New Guinea; SAF, South Africa; USA, United Sates of America.

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ISSN: 1759-8753