Fig. 2

Downregulated TEs correlates with innate immune activation. A Heatmap of correlation between expression of differentially-expressed TEs (rows) and ssGSEA scores of immune response genes (columns). Heatmap annotation: Spearman’s rho correlation coefficient (Cor). Negative to positive correlation values correspond from blue to red, respectively. p-values: * 0.001-0.05, ** 0.00001-0.001, *** < 0.00001. None, > 0.001. Log₂FC annotation: log₂ fold change values of differentially expressed TEs, ranked from the negative (yellow) to the positive (green) values. Class annotation: TE class colour as shown