Table 2 Number of TE models generated by each software from a simulated sequence containing TEs of 20 different families (see Table S1 for detailed information). Please note that REPET failed to generate an Alu model
From: Software evaluation for de novo detection of transposons
Software | Number of models generated |
|---|---|
RepeatScout | 30 |
RepeatModeler | 80 |
REPET | 82 |
Number of TE families inserted in the simulated data | 20 |