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Table 1 Datasets used for testing the TE de novo detection tools

From: Software evaluation for de novo detection of transposons

Dataset Genome version Sequences Length TE-fraction
Human genome GRCh38/hg38 p12 Chromosome 21 46.7 Mb 36.74%
Zebrafish GRCz11/danRe 11 Chromosome 1 59.6 Mb 46.58%
Fruit fly BDGP Release 6 Whole genome 137.5 Mb 17.55%
Simulated data n/a Simulation 100.1 Mb 60.00%