Fig. 3
From: SINE jumping contributes to large-scale polymorphisms in the pig genomes
Distribution of SINE RIPs. (A) Summary results of PCR evaluation for 230 randomly selected SINE RIPs (primers listed in Additional file 2). (B) Distribution of SINE RIPs across SINEA1–SINEA3 subfamilies. (C) The distribution and density of SINE RIPs on each chromosome (RIPs/Mb), the number on the right side of each chromosome indicates the density. (D) The correlation between the number of SINEA1-A3 insertions and the number of RIPs on each chromosome, Spearman’s correlation value is 0.917 which shows a significantly correlation. (E) Distributions of SINE RIPs in the 5′ UTR, 3′ UTR, and CDS regions.