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Table 3 HERVW copies differentially expressed in CIS patients

From: Upregulation of selected HERVW loci in multiple sclerosis

HERVW Copy Repeatmasker name Reads in CIS Reads in Controls Fold increase P value
chr 3-1 3q11.2 2221 124 14,76 0,0040
chr 4-3 4q31.1 92 6 12,64 0,0333
chr 5-1 5p12 3999 562 5,86 0,27
chr 9-1 9q22.31 5678 614 9,2 0,12
chr 9-2 9q31.3 81 1 > 20 0,0333
chr12-4 12q23.3 18962 20812 -1,33 0,0015
chr19-1 19p12 192 1 > 20 0,0015
  1. The table lists several HERVW copies, using references from Tables S2-S3. Names used in RepeatMasker are also indicated. The sum of mapped reads in samples from five CIS patients or five controls is listed, as well as the resulting fold change in CIS versus control. The P value for the difference between NDI and CIS samples was adjusted for multiple testing (FDR <0.05)