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Fig. 6 | Mobile DNA

Fig. 6

From: The derepression of transposable elements in lung cells is associated with the inflammatory response and gene activation in idiopathic pulmonary fibrosis

Fig. 6

Examples of the gene expression correlation with the adjacent TE loci. a Correlation plots representing the correlation between the MUC5B, CHL1, SERPINB3, and GISTA2 genes and the adjacent TE loci in the AT2 cells. b Correlation plots representing the correlation of the CCL2, MMP7, SPP1, IL1RN genes and the TEs in the AM cells. The x-axis represents the normalized expression values for the TEs, while the y-axis represents the normalized expression values for the genes. The colors represent the phenotypes (Green: donor; Red: IPF patient). The BH p.adjusted (p.adjust <‚ÄČ0.05) values for each relationship are shown; p.adjust1 represents relationship between gene expression and adjacent TE-locus expression, and p.adjust2 represents difference in the regression slopes between the two groups (IPF-red, and donor-green)

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