Hybrid dysgenesis in Drosophila virilis results in clusters of mitotic recombination and loss-of-heterozygosity but leaves meiotic recombination unaltered

Table 2 Pearson’s correlation coefficients (R) and p-values between rates of recombination and sequence parameters calculated in 250 kb intervals

Sequence Parameter		Chromosome					Total	Total minus Zero CO
Sequence Parameter		X	2	3	4	5	Total	Total minus Zero CO
TE Density	R	−0.47	−0.47	−0.33	− 0.44	−0.49	− 0.44	−0.14
TE Density	p	<0.001	< 0.001	< 0.001	< 0.001	< 0.001	< 0.001	<1E-10
Gene density	R	0.31	0.21	0.12	0.32	0.33	0.19	0.03
Gene density	p	< 0.001	0.012	0.222	< 0.001	< 0.001	< 0.001	0.506
Simple motifs	R	0.44	0.43	0.31	0.32	0.54	0.39	0.177
Simple motifs	p	< 0.001	< 0.001	< 0.001	< 0.001	< 0.001	<1E-10	< 0.001
SNP Density	R	0.64	0.553	0.60	0.67	0.65	0.62	0.49
SNP Density	p	<1E-10	<1E-10	<1E-10	<1E-10	<1E-10	<1E-10	<1E-10
GC Content	R	0.08	0.35	0.11	0.18	0.33	0.23	0.15
GC Content	p	0.372	< 0.001	0.263	0.079	< 0.001	< 0.001	< 0.001

ISSN: 1759-8753