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Fig. 3 | Mobile DNA

Fig. 3

From: The Dfam community resource of transposable element families, sequence models, and genome annotations

Fig. 3

Generation of HMMs and sequence LOGOs for DNA transposon termini. The first/last 60 bp of family consensi belonging to a single classification of DNA Transposons are piled up and aligned (without gaps) by hand. Profile HMMs are developed for each end and for the combination of the two to determine if a stronger signal may be obtained in that fashion. Finally, LOGOs are generated for each HMM and displayed on the Dfam website

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Mobile DNA

ISSN: 1759-8753