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Fig. 1 | Mobile DNA

Fig. 1

From: Hagfish genome reveals parallel evolution of 7SL RNA-derived SINEs

Fig. 1

Structure of SINE1-1_EBu. Segments showing similarity to different repeats are highlighted in different colors. Box A and Box B of RNA polymerase III promoter are in boldface. Nucleotides identical to SINE1-1_EBu consensus in alignments are colored in red. a Full-length sequence of SINE1-1_EBu. b Sequence alignment between SINE1-1_EBu, hagfish and human 7SL RNA genes and 7SL RNA-derived SINEs from Euarchontoglires. One 7SL RNA gene from hagfish in the accession number FYBX02009602 is used for alignment. FRAM, FAM and FLAM-C are ancestral primate SINE1 families, and they are monomers. Platy-1-1 is a family from the common marmoset. PB1D10 is an ancestral rodent SINE family. c Sequence alignment between hagfish SINEs related to SINE1-1_EBu and their putative autonomous counterparts. Positions inside of entire consensus sequences are shown in parentheses

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