A benchmark of transposon insertion detection tools using real data

Table 2 Annotation of LTR-retrotransposons and MITEs in rice assemblies

^a Repeatmasker fragments. Includes both intact and truncated elements
^b High confidence elements containing intact LTRs, TSDs and coding domains
^c Intact elements whose poor coding domain conservation doesn’t allow proper classification
^d Elements spanning more than 80% of its family consensus length

ISSN: 1759-8753