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Fig. 1 | Mobile DNA

Fig. 1

From: A benchmark of transposon insertion detection tools using real data

Fig. 1

Density of MITEs (a) and LTR-retrotransposons (b) along the rice chromosome 5 (window size = 50 Kb). Black circles represent centromeres. Track 1 shows the density of all elements annotated in the chromosome by RepeatMasker. Track 2 shows the density of full-length elements. Track 3 shows the density of validated non-reference insertions (MH63-specific insertions) in the benchmarking standard. Tracks 4–8 show the density of non-reference predictions of five tools

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