From: Variable genome evolution in fungi after transposon-mediated amplification of a housekeeping gene
Site categorya | Mutation typeb | Count (percent)c | |
---|---|---|---|
deRIP consensus | RIP consensus | ||
Conserved | —d | 186 | 180 |
Non-degenerate | Â | 234 | 233 |
 Conserved | – | 142 (60.7) | 135 (57.9) |
 Tv | Non-Synonymous | 56 (23.9) | 55 (23.6) |
 Ti from gH3 → rH3 | Non-Synonymous | 23 (9.8) | 32 (13.7) |
 Ti from rH3 → gH3 | Non-Synonymous | 13 (5.6) | 11 (4.7) |
Two-fold degeneratee | Â | 36 | 37 |
 Conserved | – | 20 (55.6) | 20 (54.1) |
 Tv | Non-Synonymous | 0 (0) | 1 (2.7) |
 Ti from gH3 → rH3 | Synonymous | 15 (41.7) | 15 (40.5) |
 Ti from rH3 → gH3 | Synonymous | 1 (2.8) | 1 (2.7) |
Four-fold degenerate | Â | 51 | 51 |
 Conserved | – | 8 (15.7) | 9 (17.6) |
 Tv | Synonymous | 21 (41.2) | 20 (39.2) |
 Ti from gH3 → rH3 | Synonymous | 16 (31.4) | 16 (31.4) |
 Ti from rH3 → gH3 | Synonymous | 6 (11.8) | 6 (11.8) |
Variable | Â | 192 | 198 |
 Tv | – | 100 (52.1) | 99 (50) |
 Ti from gH3 → rH3 | – | 70 (36.5) | 80 (40.4) |
 Ti from rH3 → gH3 | – | 22 (11.5) | 19 (9.6) |