Amplification of miniature inverted-repeat transposable elements and the associated impact on gene regulation and alternative splicing in mulberry (Morus notabilis)

Table 1 Summary of the MITE superfamilies identified in Morus notabilis

Superfamily	Family Number	Total Elements	Full-length Number	Partial-length Number	Full-length/Partial-length (%)	Percentage of Genome (%)	TSD
Tc1/Mariner	89	116,427	43,474	72,953	59.59	5.11	TA
PIF/Harbinger	74	89,616	15,560	74,056	21.01	4.67	TWA
hAT	21	10,288	1570	8718	18.01	0.97	8 bp
Mutator	8	8130	921	7209	12.78	0.44	9 bp
DTx	40	61,661	29,264	32,397	90.33	2.63
Total	232	286,122	90,789	195,333	46.48	13.83

ISSN: 1759-8753