Table 5 Three methylation types of C bases in bisulfite sequencing between C6706 and CV2
From: A mobile restriction modification system consisting of methylases on the IncA/C plasmid
Chromosome | Location | Constant | Differential | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
mCG | mCHG | mCHH | mCG | mCHG | mCHH | |||||
C6706 | CV2 | C6706 | CV2 | C6706 | CV2 | |||||
I | gene | 3 | 4674 | 1 | 2 | 4 | 269 | 458 | 54 | 110 |
intergenic | 1 | 263 | 0 | 2 | 3 | 37 | 30 | 15 | 18 | |
II | gene | 0 | 1400 | 0 | 4 | 3 | 76 | 159 | 23 | 39 |
intergenic | 0 | 124 | 0 | 1 | 2 | 10 | 19 | 6 | 11 | |
total | 4 | 6461 | 1 | 9 | 12 | 392 | 666 | 98 | 178 | |