Skip to main content
Fig. 1 | Mobile DNA

Fig. 1

From: Horizontal transfer of a retrotransposon between parasitic nematodes and the common shrew

Fig. 1

Contamination of the S. araneus genome. Reads of the genome were compared with DIAMOND against a UniProt reference database. Hits against nematode proteins were closer examined by annotating the proteins as RTE1_Sar, other TEs and non-TEs by comparing them against Repbase ORFs. Proteins from Trichocephalida are mostly non-TEs from Trichuris and Trichinella. Four non-RTE1_Sar TEs in Strongylids (dark blue) were annotated as RTE1_Sar when submitted to CENSOR. Graph only shows genera with more than one protein

Back to article page