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Table 3 The number of lncRNA genes and protein coding genes contain the insertions from youngest retrotransposons

From: Retrotransposons evolution and impact on lncRNA and protein coding genes in pigs

Young RTn protein coding gene lncRNA gene
L1D1 120 49
L1D2 129 60
L1D3 47 25
L1D4 61 29
L1D5 149 59
L1D6 108 28
L1D7 204 96
Total youngest L1 s 660 (3.13%) 286 (1.98%)
ERV6A 30 13
ERV6B 24 17
Total youngest ERVs 42 (0.20%) 21 (0.15%)
SINEA1 3464 1038
SINEA2 7696 2612
SINEA3 3786 1134
Total youngest SINEs 9230 (43.77%) 3402 (23.50%)
Total 9341(44.30%) 3494 (24.13%)
  1. The percentage in parentheses is the percentage of protein coding/lncRNA genes with youngest retrotransposon insertions account for total protein coding/lncRNA genes