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Table 2 Secondary structure content of RelSt3

From: Characterization of a relaxase belonging to the MOBT family, a widespread family in Firmicutes mediating the transfer of ICEs

Prediction programs

α-helix

β-strand

Turns

Unordered

 PSI-pred

43.6

10.7

ND

45.7

 SABLE

47.3

12.7

ND

40

 Jpred4

42.2

14.4

ND

43.4

 PredictProtein

38.5

15.1

ND

46.4

 APSSP2

36.3

18.8

ND

44.9

 Phyre2

42

17

ND

41

Average

41.7 ± 3.9

14.8 ± 2.9

 

43.6 ± 2.6

Deconvolution methods

α-helix

β-strand

Turns

Unordered

 Selcon3

39.7

21.4

17.7

21.8

 ContinLL

35.3

26.7

18.4

19.6

 CDSSTR

41.0

19.0

18.0

21.0

 CDNN

43.2

10.4

14.0

35.3

Average

39.8 ± 3.3

19.4 ± 6.8

17.0 ± 2.0

24.4 ± 7.3

  1. Data and standard deviation are given in percentages. ND not determined