Skip to main content

Table 2 Summary of candidate genes, TEs and TFs

From: Human transposons are an abundant supply of transcription factor binding sites and promoter activities in breast cancer cell lines

Gene name

TE class

TE family

TE subfamily

TF

SYT1 (Synaptotagmin I)

LINE

L1

L1PA2

E2F1

UCA1 (Urothelial carcinoma associated 1)

LTR

ERV1

LTR7C

C/EBPβ

AK4 (Adenylate kinase-4)

SINE

MIR

MIRb

E2F1

PSAT1 (Phosphoserine aminotransferase 1)

SINE

MIR

MIR3

E2F1