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Table 1 Summary of ChIP-seq data analyses of breast cancer-associated TFBSs [64, 81]

From: Human transposons are an abundant supply of transcription factor binding sites and promoter activities in breast cancer cell lines

TF

Data source

Total peak number

Peaks in TEs (% of total)

C/EBPβ

ENCODE

54,182

29,579 (54.6%)

E2F1

GEO

26,934

9748 (36.2%)

MYC

GEO

101,382

35,704 (35.2%)

MYC

ENCODE

61,454

15,936 (25.9%)

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Mobile DNA

ISSN: 1759-8753