From: Subtype classification and functional annotation of L1Md retrotransposon promoters
Retrotransposons annotated by RM | Type A promoters | Type G promoters | Type T promoters | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Family | Count | Count | RM % | p. % | Count | RM % | p. % | Count | RM % | p. % |
L1MdA | 40,139 | 6507 | 16.2 | 87.3 | 329 | 0.8 | 14.4 | 184 | 0.5 | 3.6 |
L1MdG | 5096 | 189 | 3.7 | 2.5 | 813 | 16.0 | 35.7 | 248 | 4.9 | 4.9 |
L1MdT | 9287 | 109 | 1.2 | 1.5 | 29 | 0.3 | 1.3 | 3447 | 37.1 | 67.4 |
L1MdF | 70,753 | 453 | 0.6 | 6.1 | 1069 | 1.5 | 46.9 | 1149 | 1.6 | 22.5 |
Others | – | 196 | – | 2.6 | 39 | – | 1.7 | 85 | – | 1.7 |