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Table 1 Identification of full-length TEs in spinach genome

From: The landscape of transposable elements and satellite DNAs in the genome of a dioecious plant spinach (Spinacia oleracea L.)

Class Order Superfamily No. Total length (bp) Percentage of genome (%)
Retrotransposons LTR Copia 5303 51,884,973 5.21
Gypsy 3709 40,349,864 4.05
Unclassifed 2628 18,203,221 1.83
LINE CRE 642 2,981,624 0.30
RTE 149 824,520 0.08
I 65 400,921 0.04
Tad1 46 287,739 0.03
R1 30 149,274 0.15
Rex 25 150,849 0.02
R2 22 90,843 0.01
others 41 227,457 0.02
subtotal   12,660 115,551,285 11.60
DNA transposons TIR Tc1-Mariner 693 175,762 0.02
hAT 397 144,071 0.01
CMC-EnSpm 290 83,402 0.01
MULE-MuDR 167 49,524 0.01
PIF 26 9245 0.00
others 27 7899 0.00
MITE   445 160,590 0.02
Helitron   1297 9,049,533 0.91
subtotal   3342 9,680,026 0.97
Total    16,002 125,231,331 12.57