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Table 2 Number of sequencing reads and UMIs corresponding to putative somatic insertions and spike-in controls

From: An advanced enrichment method for rare somatic retroelement insertions sequencing

Putative somatic Alu insertions Unnormalized Normalization 1 Normalization 2
Sequencing reads 56(47)a 609(218)a 1,525(461)a
Total number 47 171 378
Number with UMI count >‚ÄČ1 0 24 38
Spike-in controls
DR240 (in 5 cellsb) 0 4(3)a 7(4)a
DR389 (in 5 cellsb) 1(1)a 1(1)a 1(1)a
DR259 (in 1 cellc) 0 0 1(1)a
DR418 (in 1 cellc) 0 0 0
  1. aNumber of UMIs is given in parentheses
  2. bCorresponds to an insertion present in 5 out of 50,000 cells
  3. cCorresponds to an insertion present in 1 out of 50,000 cells