Table 1 Distribution of sequencing reads
From: An advanced enrichment method for rare somatic retroelement insertions sequencing
Sequencing reads | Unnormalized | Normalization 1 | Normalization 2 |
|---|---|---|---|
Total | 13,736,244 | 16,991,713 | 16,533,472 |
Unambiguously mapped to the human genome (hg38) | 8,376,753 | 7,406,323 | 5,765,382 |
Corresponding to known AluYa5 and AluYa8 | 6,484,320 | 1,180,602 | 198,024 |
Number of known AluYa5 and AluYa8 | 2134 | 2392 | 2248 |
Corresponding to other known Alu | 743,310 | 5,617,692 | 4,496,177 |
Corresponding to somatic Alu | 56 | 609 | 1525 |