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Table 1 Corresponding SVA_D subfamilies in gorilla, chimpanzee and human

From: Phylogenomic analysis reveals splicing as a mechanism of parallel evolution of non-canonical SVAs in hominine primates

Gorilla

Chimpanzee

Human

Observations

gg_SVA_D1

pt_SVA_D1

hs_SVA_D1

 

gg_SVA_D2a

   

gg_SVA_D2b

   
 

pt_SVA_D2a

hs_SVA_D2a

 
 

pt_SVA_D2b

hs_SVA_D2b

1 species-specific substitution each

gg_SVA_DR

pt_SVA_DR

hs_SVA_DR

 

gg_SVA_DRa

 

hs_SVA_D9

 

gg_SVA_DRb

  

shared substitutions with SVA_E

gg_SVA_DRc

 

hs_SVA_DRb

2 species-specific substitutions in hs

gg_SVA_D3

   

gg_SVA_D3a

 

hs_SVA_D7

3 species-specific substitutions in hs

gg_SVA_D3b

   

gg_SVA_D3c

   

gg_SVA_D4

pt_SVA_D5a

hs_SVA_D6b

1 species-specific substitution each; identical in hs&pt

gg_SVA_D4a-h

   

gg_SVA_D5a-c

   
 

pt_SVA_DRa

hs_SVA_DRa

 
 

pt_SVA_DRb

hs_SVA_Fa

2 species-specific substitution in pt; 1 in hs

 

pt_SVA_DRc

hs_SVA_D5a

2 species-specific substitution in pt; 1 in hs

 

pt_SVA_DRd

hs_SVA_D4

1 species-specific substitution in hs

 

pt_SVA_D3

hs_SVA_D3

 
 

pt_SVA_D4a/b

 

see Fig. 3c

 

pt_SVA_D4c

hs_SVA_D6f

 
 

pt_SVA_D5b/c

 

see Fig. 3c

 

pt_SVA_D6

  
  

hs_SVA_DRc

 
  

hs_SVA_D4a

 
  

hs_SVA_D5

small number of elements in pt

  

hs_SVA_D5b

 
  

hs_SVA_D6a, c, d, e

see Fig. 3c

  

hs_SVA_D8

 
  1. Subfamilies listed in a single column are species-specific. Species-specific substitutions in the last column refer to substitutions present in addition to those shared across species. gg gorilla, pt chimpanzee, hs human