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Fig. 1 | Mobile DNA

Fig. 1

From: F-CphI represents a new homing endonuclease family using the Endo VII catalytic motif

Fig. 1

Sequence alignment. a, b The C-terminal part of F-CphI aligns with the N-terminal catalytic domain of Endo VII. c Sequence logo shows the consensus sequence from the multiple sequence alignment in Additional file 3: Figure S2. The positions of the conserved residues in F-CphI and Endo VII are shown on the top, and F-CphI mutants generated in this study are shown on the bottom. At each position of the sequence logo, the total height of a stack of letters shows the information content in bits that is calculated from a profile hidden Markov model (see Methods), and the height of a letter relative to the total height of letters at a position represents the letter’s frequency. The red lines indicate gaps in the multiple sequence alignment

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