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Table 2 Summary of selection detection tests

From: Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

ORF

Regions

PARRIS

GA Branch

 

Positively selected sites

Mean dN/dS

Number of branches with positive selection

SLAC

FEL

REL

ORF 1

5′ terminus

0.678 ± 0.362

0

0

0

9

Coiled coil

0.444 ± 0.319

0

0

48

0

RRM

0.268 ± 0.258

0

0

52

0

CTD

0.302 ± 0.398

0

0

0

0

ORF 2

5′ terminus (1–2207)

0.248 ± 0.344

0

0

107,157,299

107, 299

3′ terminus (2207-end)

0.267 ± 0.360

0

0

0

0