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Table 2 PCR validation results for each Alu subfamily

From: Recently integrated Alu insertions in the squirrel monkey (Saimiri) lineage and application for population analyses

  Subfamily N Fixed Polymorphic   Subfamily N Fixed Polymorphic
1 sf36 14 10 4 25 subfam15 5 4 1
2 sf37 12 10 2 26 subfam17 1 1 0
3 sf38 16 11 5 27 subfam18 1 1 0
4 sf42 24 15 9 28 subfam2 3 3 0
5 sf44 17 14 3 29 subfam21 1 1 0
6 sf46 15 9 6 30 subfam26 11 9 2
7 sf47 11 7 4 31 subfam27 1 1 0
8 sf51 16 8 8 32 subfam29 6 4 2
9 sf52 17 14 3 33 subfam30 1 1 0
10 sf53 3 2 1 34 subfam32 15 11 4*
11 sf62 12 7 5 35 subfam36 12 7 5
12 sf63 16 11 5 36 subfam37 4 4 0
13 sf65 1 1 0 37 subfam39 5 4 1
14 sf66 13 10 3 38 subfam4 7 5 2
15 sf71 14 12 2 39 subfam43 8 7 1
16 sf73 11 5 6 40 subfam45 3 3 0
17 sf82 15 10 5 41 subfam47 1 1 0
18 sf85 3 1 2 42 subfam5 9 5 4
19 sf86 11 9 2 43 subfam7 1 1 0
20 subfam0 9 6 3 44 subfam9 4 3 1
21 subfam11 3 1 2* 45 Ta10 5 5 0
22 subfam12 12 7 5 46 Ta15 5 4 1*
23 subfam13 2 2 0      
24 subfam14 6 5 1 Total   382 272 110
  1. *Three loci in the polymorphic column, L-21071-subfam11, L-38701-subfam32 and L-19471-Ta15, were homozygous absent for the Alu in all 32 squirrel monkey samples on the DNA panel