Table 5 DNA transposons
From: Human transposable elements in Repbase: genomic footprints from fish to humans
Superfamily | Consensus sequences |
|---|---|
Crypton | Eulor5A, Eulor5B, Eulor6A, Eulor6B, Eulor6C, Eulor6D, Eulor6E |
hAT | BLACKJACK, CHARLIE1 (Charlie1), CHARLIE1A (Charlie1a), CHARLIE1B (Charlie1b), CHARLIE2, CHARLIE2A (Charlie2a), CHARLIE2B (Charlie2b), CHARLIE3 (Charlie3), CHARLIE4 (Charlie4), CHARLIE5 (Charlie5), CHARLIE6 (Charlie6), CHARLIE7 (Charlie7), CHARLIE8 (Charlie8), CHARLIE8A (MER102A), CHARLIE9 (Charlie9), CHARLIE10 (Charlie10), Charlie11, Charlie12, Charlie13a, Charlie13b, Charlie15a, Charlie16a, Charlie17a, Charlie18a, Charlie19a, Charlie21a, Charlie22a, Charlie24, Charlie25, Charlie26a, Charlie27, Charlie28, CHESHIRE (Cheshire), CHESHIRE_A, CHESHIRE_B, EUTREP1, EUTREP3, EuthAT-1, EuthAT-2, EuthAT-2B, EuthAT-N1, Eutr7, Eutr8, Eutr17, FORDPREFECT (FordPrefect), FORDPREFECT_A (FordPrefect_a), MARE5, MER1A, MER1B, MER3, MER5A, MER5A1, MER5B, MER5C, MER5C1, MER20, MER20B, MER30, MER30B, MER33, MER45 (MER45A), MER45B, MER45C, MER45R, MER58A, MER58B, MER58C, MER58D, MER63A, MER63B, MER63C, MER63D, MER69A (Arthur1A), MER69B (Arthur1B), MER69C (Arthur1), MER80 (Charlie4a), MER80B, MER81, MER91A, MER91B, MER91C, MER94, MER94B, MER96, MER96B, MER97A (MER97a), MER97B (MER97b), MER97C (MER97c), MER97d, MER99, MER103, MER103B, MER103C, MER105, MER106 (MER106A), MER106B, MER107, MER112, MER113, MER113B, MER115, MER117, MER119, MER121, MamRep1879, MamRep1894, MamRep38, MamRep4096, MamRep488, ORSL, ORSL-2a, ORSL-2b, UCON34, UCON50, UCON52, UCON74, UCON79, UCON81, UCON95, UCON107, UCON132a, UCON132b, X7_DNA, X15_DNA, X21_DNA, X28_DNA, X31_DNA, ZAPHOD (Zaphod), Zaphod3 |
Helitron | Helitron1Nb_Mam, Helitron3Na_Mam |
Kolobok | UCON29 |
Mariner/Tc1 | EutTc1-N1, GOLEM (Tigger3), GOLEM_A (Tigger3a), GOLEM_B, GOLEM_C, HSMAR1, HSMAR2, HSTC2, Kanga1, Kanga1d, KANGA2_A (Kanga2_a), Kanga11a, MADE1, MARE1, MARE10, MARNA, MER2, MER2B, MER6, MER6A, MER6B, MER6C, MER8, MER28 (Tigger2a), MER44A, MER44B, MER44C, MER44D, MER46C, MER47B, MER47C, MER53, MER82, MER104, MER104A (Kanga1a), MER104B (Kanga1b), MER104C (Kanga1c), MER116, MER127, MER132, MERX, MamRep137, MamRep434, TIGGER1 (Tigger1), TIGGER2 (Tigger2), Tigger3b, Tigger3c, Tigger3d, Tigger4a, TIGGER5 (Tigger5), TIGGER5A (MER47A), TIGGER5_A, TIGGER5_B (Tigger5b), TIGGER6A (Tigger6a), TIGGER6B (Tigger6b), TIGGER7 (Tigger7), TIGGER8 (Tigger8), TIGGER9, Tigger9b, Tigger10, Tigger12, Tigger12A, Tigger13a, Tigger14a, Tigger15a, Tigger16a, Tigger16b, Tigger2b_Pri, UCON39, UCON42, UCON104, X1_DNA, X6a_DNA, X6b_DNA, X10a_DNA, X10b_DNA, X13_DNA, X25_DNA, X26_DNA, X32_DNA, X33a_DNA, ZOMBI (Tigger4), ZOMBI_A, ZOMBI_B, ZOMBI_C |
Merlin | Merlin1_HS |
MuDR | RICKSHA (Ricksha), RICKSHA_0 (Ricksha_0), Ricksha_a |
piggyBac | LOOPER (Looper), MER75, MER75A, MER75B, MER85 |
Unclassified | MER123, MER125, MER126, MER136, DNA1_Mam, X2a_DNA, X2b_DNA, X4a_DNA, X4b_DNA, X5a_DNA, X5b_DNA, X9a_DNA, X9b_DNA, X9c_DNA, X11_DNA, X12_DNA, X17_DNA, X18_DNA, X20_DNA, X22_DNA, X23_DNA, X24_DNA, X27_DNA, X29a_DNA, X29b_DNA, X30_DNA, X34_DNA |