Table 2 Normalized number of putative complete LTR-retrotransposons identified in each genome and classified by lineage
From: Virus-like attachment sites as structural landmarks of plants retrotransposons
Plant genomes | Putative complete elements genome contribution by lineage (%) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Ale | Angela | Bianca | Ivana | Maximus | Tar | Athila | CRM | Del | Galadriel | Reina | |
At | 12.0 | 2.0 | 5.0 | 15.0 | 7.0 | 12.0 | 24.0 | 3.0 | 11.0 | 0.0 | 9.0 |
Mt | 7.8 | 1.7 | 0.9 | 8.4 | 22.3 | 10.6 | 32.0 | 0.9 | 12.3 | 0.0 | 3.0 |
Pt | 37.8 | 0.6 | 0.3 | 21.1 | 0.0 | 8.8 | 9.4 | 6.9 | 0.9 | 1.8 | 12.4 |
Vv | 43.8 | 6.2 | 4.4 | 4.6 | 1.7 | 10.2 | 21.7 | 1.8 | 0.7 | 2.1 | 2.8 |
Gm | 2.3 | 5.3 | 0.0 | 7.3 | 22.9 | 4.5 | 25.2 | 20.3 | 1.9 | 0.0 | 10.3 |
Bd | 14.8 | 13.1 | 3.0 | 10.1 | 2.4 | 1.5 | 40.9 | 5.4 | 2.6 | 0.0 | 6.4 |
Os | 6.3 | 3.9 | 0.1 | 4.8 | 3.6 | 8.6 | 45.7 | 2.2 | 18.7 | 0.1 | 6.0 |
Si | 6.9 | 28.2 | 0.0 | 2.6 | 0.6 | 2.5 | 37.3 | 7.5 | 11.8 | 0.0 | 2.7 |
Sb | 3.9 | 1.3 | 0.6 | 3.6 | 7.2 | 0.4 | 61.8 | 4.0 | 12.9 | 0.0 | 4.3 |
Zm | 2.1 | 1.4 | 0.2 | 1.0 | 36.6 | 0.5 | 43.8 | 2.3 | 9.2 | 0.0 | 2.8 |
Superfamily | Copia | Copia | Copia | Copia | Copia | Copia | Gypsy | Gypsy | Gypsy | Gypsy | Gypsy |