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Table 4 Distribution of LTR families in teleost genomesa

From: The contribution of transposable elements to size variations between four teleost genomes

Group

Clade

Zebrafish

Medaka

Stickleback

Tentradon

Total

 

261

38

77

8

BEL

 

54

6

11

 
 

Suzu

2

1

2

 
 

Sinbad

32

4

9

 
 

PAO

20

1

  

Copia

 

4

1

3

 

DIRS

 

3

   

ERV

 

10

1

16

 
 

Epsilonretrovirus

9

1

16

 
 

Spumaretrovirus

1

   

Ngaro

 

5

   

Gypsy

 

190

37

61

8

 

Osvaldo/Gmr

61

3

22

1

 

Barthez

60

11

10

1

 

Skipper

4

1

1

1

 

CsRN1

 

1

2

1

 

V-clade

29

17

19

 
 

ReTe1

8

3

2

3

 

Mag

28

1

5

1

  1. aThe newly identified LTRs by LTRHarvest and RetroTector programmes were combined with known LTRs from RepBase, and the family was built up based on the similarity of amino acid sequence of LTR elements (80 %)
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